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SSDBM
2006
IEEE
163views Database» more  SSDBM 2006»
14 years 2 months ago
ACache: Using Caching to Improve the Performance of Multiple Sequence Alignments
Multiple sequence alignment represents a class of powerful bioinformatics tools with many uses in computational biology ranging from discovery of characteristic motifs and conserv...
Xun Tu, Kajal T. Claypool, Cindy X. Chen
BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
14 years 2 months ago
Highly Scalable and Accurate Seeds for Subsequence Alignment
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Abhijit Pol, Tamer Kahveci
SSDBM
2005
IEEE
99views Database» more  SSDBM 2005»
14 years 2 months ago
Incorporating Semantics in Scientific Workflow Authoring
The tools used to analyze scientific data are often distinct from those used to archive, retrieve, and query data. A scientific workflow environment, however, allows one to seamles...
Chad Berkley, Shawn Bowers, Matthew B. Jones, Bert...
SSDBM
2005
IEEE
148views Database» more  SSDBM 2005»
14 years 2 months ago
A Fast Approximation Scheme for Probabilistic Wavelet Synopses
Several studies have demonstrated the effectiveness of Haar wavelets in reducing large amounts of data down to compact wavelet synopses that can be used to obtain fast, accurate a...
Antonios Deligiannakis, Minos N. Garofalakis, Nick...
VLDB
2005
ACM
126views Database» more  VLDB 2005»
14 years 2 months ago
Hubble: An Advanced Dynamic Folder Technology for XML
A significant amount of information is stored in computer systems today, but people are struggling to manage their documents such that the information is easily found. XML is a de...
Ning Li, Joshua Hui, Hui-I Hsiao, Kevin S. Beyer
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