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» R parallel - speeding up bioinformatics analysis with R
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ISOLA
2010
Springer
13 years 6 months ago
A Linked Data Approach to Sharing Workflows and Workflow Results
A bioinformatics analysis pipeline is often highly elaborate, due to the inherent complexity of biological systems and the variety and size of laboratory publications would be high...
Marco Roos, Sean Bechhofer, Jun Zhao, Paolo Missie...
COCOON
2007
Springer
14 years 1 months ago
Connected Coloring Completion for General Graphs: Algorithms and Complexity
An r-component connected coloring of a graph is a coloring of the vertices so that each color class induces a subgraph having at most r connected components. The concept has been w...
Benny Chor, Michael R. Fellows, Mark A. Ragan, Igo...
BMCBI
2004
111views more  BMCBI 2004»
13 years 7 months ago
The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases
Background: The Hotdog fold was initially identified in the structure of Escherichia coli FabA and subsequently in 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas sp. strain CB...
Shane C. Dillon, Alex Bateman
BIOTECHNO
2008
IEEE
14 years 2 months ago
Exploiting Codon-Triplets Association for Genome Primary Structure Analysis
— The way evolution shapes the arrangement of synonymous codons within open reading frames (ORF) for fine tuning mRNA decoding efficiency is not yet understood. Since the ribosom...
José P. Lousado, Gabriela R. Moura, Manuel ...
CSB
2005
IEEE
141views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Joint Genomic and Metabolomic Analysis of Toxic Dose-Response Experiments
A methodology has been implemented for analyzing microarray and NMR spectral data obtained from the same set of toxic-exposure dose-response experiments. The NMR spectra additiona...
Gary L. Jahns, Nicholas J. DelRaso, Mark P. Westri...