269 search results - page 5 / 54 » Reconfigurable Molecular Dynamics Simulator |
FPL
2007
Springer
14 years 2 months ago
2007
Springer
: Molecular dynamics simulation based on discrete event simulation (DMD) is emerging as an alternative to time-step driven molecular dynamics (MD). DMD uses simplified discretized ...
DAGSTUHL
2010
14 years 14 days ago
2010
We present a novel method to measure saliency in molecular dynamics simulation data. This saliency measure is based on a multiscale center-surround mechanism, which is fast and ef...
ASAP
2009
IEEE
14 years 8 months ago
2009
IEEE
—Molecular dynamics simulation based on discrete event simulation (DMD) is emerging as an alternative to time-step driven molecular dynamics (MD). DMD uses simplified discretize...
FPL
2005
Springer
14 years 4 months ago
2005
Springer
Molecular Dynamics (MD) is of central importance to computational chemistry. Here we show that MD can be implemented efficiently on a COTS FPGA board, and that speedups from ¿½...
BMCBI
2005
13 years 11 months ago
2005
Background: We have developed the program PERMOL for semi-automated homology modeling of proteins. It is based on restrained molecular dynamics using a simulated annealing protoco...