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» Reducing Component Systems' Behavior Specification
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BMCBI
2007
103views more  BMCBI 2007»
13 years 9 months ago
Dynamic simulation of regulatory networks using SQUAD
Background: The ambition of most molecular biologists is the understanding of the intricate network of molecular interactions that control biological systems. As scientists uncove...
Alessandro Di Cara, Abhishek Garg, Giovanni De Mic...
FMSB
2008
199views Formal Methods» more  FMSB 2008»
13 years 10 months ago
Bounded Asynchrony: Concurrency for Modeling Cell-Cell Interactions
We introduce bounded asynchrony, a notion of concurrency tailored to the modeling of biological cell-cell interactions. Bounded asynchrony is the result of a scheduler that bounds ...
Jasmin Fisher, Thomas A. Henzinger, Maria Mateescu...
ICCD
2005
IEEE
128views Hardware» more  ICCD 2005»
14 years 5 months ago
Automatic Synthesis of Composable Sequential Quantum Boolean Circuits
This paper presents a methodology to transfer self-timed circuit specifications into sequential quantum Boolean circuits (SQBCs) and composable SQBCs (CQBCs). State graphs (SGs) a...
Li-Kai Chang, Fu-Chiung Cheng
JLP
2006
126views more  JLP 2006»
13 years 8 months ago
Compositional modeling and refinement for hierarchical hybrid systems
In this paper, we develop a theory of modular design and refinement of hierarchical hybrid systems. In particular, we present compositional trace-based semantics for the language ...
Rajeev Alur, Radu Grosu, Insup Lee, Oleg Sokolsky
HYBRID
2000
Springer
14 years 12 days ago
Towards Procedures for Systematically Deriving Hybrid Models of Complex Systems
Abstract. In many cases, complex system behaviors are naturally modeled as nonlinear differential equations. However, these equations are often hard to analyze because of "sti...
Pieter J. Mosterman, Gautam Biswas