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» Refactoring module structure
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BMCBI
2007
99views more  BMCBI 2007»
13 years 10 months ago
Statistical significance of cis-regulatory modules
Background: It is becoming increasingly important for researchers to be able to scan through large genomic regions for transcription factor binding sites or clusters of binding si...
Dustin E. Schones, Andrew D. Smith, Michael Q. Zha...
BMCBI
2007
136views more  BMCBI 2007»
13 years 10 months ago
Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
Xiaoyu Chen, Mathieu Blanchette
DAC
2003
ACM
14 years 10 months ago
Multilevel floorplanning/placement for large-scale modules using B*-trees
We present in this paper a multilevel floorplanning/placement framework based on the B*-tree representation, called MB*-tree, to handle the floorplanning and packing for large-sca...
Hsun-Cheng Lee, Yao-Wen Chang, Jer-Ming Hsu, Hanna...
SIGCOMM
2009
ACM
14 years 4 months ago
PLUG: flexible lookup modules for rapid deployment of new protocols in high-speed routers
New protocols for the data link and network layer are being proposed to address limitations of current protocols in terms of scalability, security, and manageability. High-speed r...
Lorenzo De Carli, Yi Pan, Amit Kumar, Cristian Est...
IJBRA
2010
134views more  IJBRA 2010»
13 years 8 months ago
Deterministic graph-theoretic algorithm for detecting modules in biological interaction networks
—Accumulating evidence suggests that biological systems exhibit modular organization. Accurate identification of modularity is vital for understanding this organization. A recen...
Roger L. Chang, Feng Luo, Stuart Johnson, Richard ...