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» Resolving Concurrent Interactions
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107
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BMCBI
2007
99views more  BMCBI 2007»
15 years 2 months ago
The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data
Background: The combination of mass spectrometry and solution phase amide hydrogen/deuterium exchange (H/D exchange) experiments is an effective method for characterizing protein ...
B. D. Pascal, M. J. Chalmers, S. A. Busby, C. C. M...
102
Voted
BMCBI
2008
97views more  BMCBI 2008»
15 years 2 months ago
Large-scale directional relationship extraction and resolution
Background: Relationships between entities such as genes, chemicals, metabolites, phenotypes and diseases in MEDLINE are often directional. That is, one may affect the other in a ...
Cory B. Giles, Jonathan D. Wren
BMCBI
2007
186views more  BMCBI 2007»
15 years 2 months ago
Modeling human cancer-related regulatory modules by GA-RNN hybrid algorithms
Background: Modeling cancer-related regulatory modules from gene expression profiling of cancer tissues is expected to contribute to our understanding of cancer biology as well as...
Jung-Hsien Chiang, Shih-Yi Chao
IR
2006
15 years 2 months ago
Evolving local and global weighting schemes in information retrieval
This paper describes a method, using Genetic Programming, to automatically determine term weighting schemes for the vector space model. Based on a set of queries and their human de...
Ronan Cummins, Colm O'Riordan
SP
2008
IEEE
138views Security Privacy» more  SP 2008»
15 years 2 months ago
A performance tuning methodology with compiler support
We have developed an environment, based upon robust, existing, open source software, for tuning applications written using MPI, OpenMP or both. The goal of this effort, which inte...
Oscar Hernandez, Barbara M. Chapman, Haoqiang Jin