Sciweavers

437 search results - page 27 / 88
» Resource-efficient computing paradigm for computational prot...
Sort
View
JOT
2010
117views more  JOT 2010»
13 years 6 months ago
Formal Model and DSL for Separation of Concerns based on Views
The separation of concerns (SOC), as a conceptual tool, enables us to manage the complexity of software systems that we develop. The benefits of this paradigm, such as reuse, enhan...
Mehdi Adda, Hamid Mcheick, Hafedh Mili
BMCBI
2010
190views more  BMCBI 2010»
13 years 7 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
CEC
2010
IEEE
13 years 8 months ago
A parallel framework for multi-objective evolutionary optimization
This work focuses on the development of a parallel framework method to improve the effectiveness and the efficiency of the obtained solutions by Multi-objective Evolutionary Algori...
Dipankar Dasgupta, David Camilo Becerra Romero, Al...
RECOMB
2007
Springer
14 years 8 months ago
Free Energy Estimates of All-Atom Protein Structures Using Generalized Belief Propagation
We present a technique for approximating the free energy of protein structures using Generalized Belief Propagation (GBP). The accuracy and utility of these estimates are then demo...
Hetunandan Kamisetty, Eric P. Xing, Christopher Ja...
CIBCB
2005
IEEE
14 years 1 months ago
The Homology Kernel: A Biologically Motivated Sequence Embedding into Euclidean Space
— Part of the challenge of modeling protein sequences is their discrete nature. Many of the most powerful statistical and learning techniques are applicable to points in a Euclid...
Eleazar Eskin, Sagi Snir