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» Retrieval with gene queries
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151
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IADIS
2004
15 years 7 months ago
Relevance feedback using semantic association between indexing terms in large free text corpuses
Relevance feedback has been considered as a means of incorporating learning into information retrieval systems for quite sometime now. This paper discusses the research results of...
Shahzad Khan, Kenan Azam
156
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SIGIR
2011
ACM
14 years 8 months ago
Parameterized concept weighting in verbose queries
The majority of the current information retrieval models weight the query concepts (e.g., terms or phrases) in an unsupervised manner, based solely on the collection statistics. I...
Michael Bendersky, Donald Metzler, W. Bruce Croft
172
Voted
BMCBI
2008
164views more  BMCBI 2008»
15 years 5 months ago
MeInfoText: associated gene methylation and cancer information from text mining
Background: DNA methylation is an important epigenetic modification of the genome. Abnormal DNA methylation may result in silencing of tumor suppressor genes and is common in a va...
Yu-Ching Fang, Hsuan-Cheng Huang, Hsueh-Fen Juan
156
Voted
BMCBI
2006
163views more  BMCBI 2006»
15 years 5 months ago
Ensemble attribute profile clustering: discovering and characterizing groups of genes with similar patterns of biological featur
Background: Ensemble attribute profile clustering is a novel, text-based strategy for analyzing a userdefined list of genes and/or proteins. The strategy exploits annotation data ...
J. R. Semeiks, A. Rizki, Mina J. Bissell, I. Saira...
BMCBI
2007
141views more  BMCBI 2007»
15 years 5 months ago
On the origin and evolution of biosynthetic pathways: integrating microarray data with structure and organization of the Common
Background: The lysine, threonine, and methionine biosynthetic pathways share the three initial enzymatic steps, which are referred to as the Common Pathway (CP). In Escherichia c...
Marco Fondi, Matteo Brilli, Renato Fani