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BMCBI
2006
165views more  BMCBI 2006»
13 years 6 months ago
Validation and functional annotation of expression-based clusters based on gene ontology
Background: The biological interpretation of large-scale gene expression data is one of the paramount challenges in current bioinformatics. In particular, placing the results in t...
Ralf Steuer, Peter Humburg, Joachim Selbig
BMCBI
2006
199views more  BMCBI 2006»
13 years 6 months ago
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
Background: Microarray technology has become a widely accepted and standardized tool in biology. The first microarray data analysis programs were developed to support pair-wise co...
Björn Usadel, Axel Nagel, Dirk Steinhauser, Y...
BMCBI
2006
153views more  BMCBI 2006»
13 years 6 months ago
Automatic document classification of biological literature
Background: Document classification is a wide-spread problem with many applications, from organizing search engine snippets to spam filtering. We previously described Textpresso, ...
David Chen, Hans-Michael Müller, Paul W. Ster...
ENTCS
2006
155views more  ENTCS 2006»
13 years 6 months ago
Mathematical Service Trading Based on Equational Matching
Mathematical software libraries provide many computational services. Mathematical operators properties can be used to combine several services in order to provide more complex one...
Aurélie Hurault, Marc Pantel
BMCBI
2007
115views more  BMCBI 2007»
13 years 6 months ago
Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
Background: We performed an exhaustive search for local structural similarities in an ensemble of non-redundant protein functional sites. With the purpose of finding new examples ...
Gabriele Ausiello, Daniele Peluso, Allegra Via, Ma...