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DAC
2009
ACM
14 years 9 months ago
ILP-based pin-count aware design methodology for microfluidic biochips
Digital microfluidic biochips have emerged as a popular alternative for laboratory experiments. To make the biochip feasible for practical applications, pin-count reduction is a k...
Cliff Chiung-Yu Lin, Yao-Wen Chang
RECOMB
2007
Springer
14 years 9 months ago
Minimizing and Learning Energy Functions for Side-Chain Prediction
Abstract. Side-chain prediction is an important subproblem of the general protein folding problem. Despite much progress in side-chain prediction, performance is far from satisfact...
Chen Yanover, Ora Schueler-Furman, Yair Weiss
ICALP
2009
Springer
14 years 9 months ago
Universal Succinct Representations of Trees?
Abstract. We consider the succinct representation of ordinal and cardinal trees on the RAM with logarithmic word size. Given a tree T, our representations support the following ope...
Arash Farzan, Rajeev Raman, S. Srinivasa Rao
ICALP
2009
Springer
14 years 9 months ago
Approximation Algorithms via Structural Results for Apex-Minor-Free Graphs
We develop new structural results for apex-minor-free graphs and show their power by developing two new approximation algorithms. The first is an additive approximation for colorin...
Erik D. Demaine, MohammadTaghi Hajiaghayi, Ken-ich...
ICALP
2009
Springer
14 years 9 months ago
Algorithms for Secretary Problems on Graphs and Hypergraphs
We examine several online matching problems, with applications to Internet advertising reservation systems. Consider an edge-weighted bipartite graph G, with partite sets L, R. We...
Martin Pál, Nitish Korula