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BMCBI
2006
179views more  BMCBI 2006»
13 years 8 months ago
Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
Howard Salis, Vassilios Sotiropoulos, Yiannis N. K...
MICRO
2006
IEEE
94views Hardware» more  MICRO 2006»
13 years 8 months ago
A Sampling Method Focusing on Practicality
In the past few years, several research works have demonstrated that sampling can drastically speed up architecture simulation, and several of these sampling techniques are already...
Daniel Gracia Pérez, Hugues Berry, Olivier ...
JPDC
2007
167views more  JPDC 2007»
13 years 8 months ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
ANOR
2002
99views more  ANOR 2002»
13 years 8 months ago
An Inventory-Location Model: Formulation, Solution Algorithm and Computational Results
We introduce a distribution center (DC) location model that incorporates working inventory and safety stock inventory costs at the distribution centers. In addition, the model inco...
Mark S. Daskin, Collette R. Coullard, Zuo-Jun Max ...
BMCBI
2004
111views more  BMCBI 2004»
13 years 8 months ago
Multiclass discovery in array data
Background: A routine goal in the analysis of microarray data is to identify genes with expression levels that correlate with known classes of experiments. In a growing number of ...
Yingchun Liu, Markus Ringnér