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130
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BIBM
2009
IEEE
155views Bioinformatics» more  BIBM 2009»
15 years 9 months ago
Towards Reliable Isoform Quantification Using RNA-Seq Data
Background: In eukaryotes, alternative splicing often generates multiple splice variants from a single gene. Here weexplore the use of RNA sequencing (RNA-Seq) datasets to address...
Brian E. Howard, Steffen Heber
BMCBI
2007
135views more  BMCBI 2007»
15 years 2 months ago
RECOVIR: An application package to automatically identify some single stranded RNA viruses using capsid protein residues that un
Background: Most single stranded RNA (ssRNA) viruses mutate rapidly to generate large number of strains having highly divergent capsid sequences. Accurate strain recognition in un...
Dianhui Zhu, George E. Fox, Sugoto Chakravarty
138
Voted
BMCBI
2008
173views more  BMCBI 2008»
15 years 2 months ago
Extraction of semantic biomedical relations from text using conditional random fields
Background: The increasing amount of published literature in biomedicine represents an immense source of knowledge, which can only efficiently be accessed by a new generation of a...
Markus Bundschus, Mathäus Dejori, Martin Stet...
118
Voted
SOFSEM
2007
Springer
15 years 8 months ago
Automatic Testing of Object-Oriented Software
Effective testing involves preparing test oracles and test cases, two activities which are too tedious to be effectively performed by humans, yet for the most part remain manual. T...
Bertrand Meyer, Ilinca Ciupa, Andreas Leitner, Lis...
GECCO
2004
Springer
197views Optimization» more  GECCO 2004»
15 years 8 months ago
Applying Evolutionary Testing to Search for Critical Defects
Software systems are used regularly in safety-relevant applications. Therefore, the occurrence of critical defects may not only cause costly recalls but may also endanger human liv...
André Baresel, Harmen Sthamer, Joachim Wege...