The Arabidopsis Gene Regulatory Information Server (AGRIS; http://arabidopsis.med.ohio-state .edu/) provides a comprehensive resource for gene regulatory studies in the model plan...
Alper Yilmaz, Maria Katherine Mejia-Guerra, Kyle K...
Background: Next-generation sequencing technologies allow genomes to be sequenced more quickly and less expensively than ever before. However, as sequencing technology has improve...
Background: The function of a novel gene product is typically predicted by transitive assignment of annotation from similar sequences. We describe a novel method, GOtcha, for pred...
David M. A. Martin, Matthew Berriman, Geoffrey J. ...
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
Background: Population genetics studies based on the analysis of mtDNA and mitochondrial disease studies have produced a huge quantity of sequence data and related information. Th...