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BMCBI
2007
102views more  BMCBI 2007»
13 years 7 months ago
Identification of homologs in insignificant blast hits by exploiting extrinsic gene properties
Background: Homology is a key concept in both evolutionary biology and genomics. Detection of homology is crucial in fields like the functional annotation of protein sequences and...
Jos Boekhorst, Berend Snel
BMCBI
2007
116views more  BMCBI 2007»
13 years 7 months ago
Clustering protein environments for function prediction: finding PROSITE motifs in 3D
Background: Structural genomics initiatives are producing increasing numbers of threedimensional (3D) structures for which there is little functional information. Structure-based ...
Sungroh Yoon, Jessica C. Ebert, Eui-Young Chung, G...
BMCBI
2005
123views more  BMCBI 2005»
13 years 7 months ago
PSI-BLAST-ISS: an intermediate sequence search tool for estimation of the position-specific alignment reliability
Background: Protein sequence alignments have become indispensable for virtually any evolutionary, structural or functional study involving proteins. Modern sequence search and com...
Mindaugas Margelevicius, Ceslovas Venclovas
TITB
2002
98views more  TITB 2002»
13 years 7 months ago
OILing the way to machine understandable bioinformatics resources
The complex questions and analyses posed by biologists, as well as the diverse data resources they develop, require the fusion of evidence from different, independently developed ...
Robert Stevens, Carole A. Goble, Ian Horrocks, Sea...
ESWS
2010
Springer
13 years 6 months ago
DSMW: Distributed Semantic MediaWiki
DSMW is an extension to Semantic Mediawiki (SMW), it allows to create a network of SMW servers that share common semantic wiki pages. DSMW users can create communication channels b...
Hala Skaf-Molli, Gérôme Canals, Pasca...