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ISMIS
2005
Springer
14 years 3 months ago
A Machine Text-Inspired Machine Learning Approach for Identification of Transmembrane Helix Boundaries
In this paper, we adapt a statistical learning approach, inspired by automated topic segmentation techniques in speech-recognized documents to the challenging protein segmentation ...
Betty Yee Man Cheng, Jaime G. Carbonell, Judith Kl...
BMCBI
2007
113views more  BMCBI 2007»
13 years 10 months ago
Learning biophysically-motivated parameters for alpha helix prediction
Background: Our goal is to develop a state-of-the-art protein secondary structure predictor, with an intuitive and biophysically-motivated energy model. We treat structure predict...
Blaise Gassend, Charles W. O'Donnell, William Thie...
NAR
2006
77views more  NAR 2006»
13 years 10 months ago
SMART 5: domains in the context of genomes and networks
The Simple Modular Architecture Research Tool 10 (SMART) is an online resource (http://smart.embl. de/) used for protein domain identification and the analysis of protein domain a...
Ivica Letunic, Richard R. Copley, Birgit Pils, Ste...
AI
2010
Springer
13 years 10 months ago
Optimal query complexity bounds for finding graphs
We consider the problem of finding an unknown graph by using two types of queries with an additive property. Given a graph, an additive query asks the number of edges in a set of ...
Sung-Soon Choi, Jeong Han Kim
BMCBI
2008
103views more  BMCBI 2008»
13 years 10 months ago
The VirusBanker database uses a Java program to allow flexible searching through Bunyaviridae sequences
Background: Viruses of the Bunyaviridae have segmented negative-stranded RNA genomes and several of them cause significant disease. Many partial sequences have been obtained from ...
Mathieu Fourment, Mark J. Gibbs