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ALMOB
2008
160views more  ALMOB 2008»
13 years 10 months ago
Syntenator: Multiple gene order alignments with a gene-specific scoring function
Background: Identification of homologous regions or conserved syntenies across genomes is one crucial step in comparative genomics. This task is usually performed by genome alignm...
Christian Rödelsperger, Christoph Dieterich
AML
2007
68views more  AML 2007»
13 years 10 months ago
A note on weak dividing
We study the notion of weak dividing introduced by S. Shelah. In particular we prove that T is stable iff weak dividing is symmetric. In order to study simple theories Shelah orig...
Byunghan Kim, Niandong Shi
BMCBI
2010
120views more  BMCBI 2010»
13 years 10 months ago
Examination of the relationship between essential genes in PPI network and hub proteins in reverse nearest neighbor topology
Background: In many protein-protein interaction (PPI) networks, densely connected hub proteins are more likely to be essential proteins. This is referred to as the "centralit...
Kang Ning, Hoong Kee Ng, Sriganesh Srihari, Hon Wa...
BMCBI
2007
146views more  BMCBI 2007»
13 years 10 months ago
Spatial location and its relevance for terminological inferences in bio-ontologies
Background: An adequate and expressive ontological representation of biological organisms and their parts requires formal reasoning mechanisms for their relations of physical aggr...
Stefan Schulz, Kornél G. Markó, Udo ...
CORR
2008
Springer
96views Education» more  CORR 2008»
13 years 10 months ago
Improved Approximations for Multiprocessor Scheduling Under Uncertainty
This paper presents improved approximation algorithms for the problem of multiprocessor scheduling under uncertainty (SUU), in which the execution of each job may fail probabilist...
Christopher Y. Crutchfield, Zoran Dzunic, Jeremy T...