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BMCBI
2007
265views more  BMCBI 2007»
13 years 7 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
BMCBI
2006
157views more  BMCBI 2006»
13 years 7 months ago
Determination of the minimum number of microarray experiments for discovery of gene expression patterns
Background: One type of DNA microarray experiment is discovery of gene expression patterns for a cell line undergoing a biological process over a series of time points. Two import...
Fang-Xiang Wu, W. J. Zhang, Anthony J. Kusalik
WWW
2006
ACM
14 years 8 months ago
Knowledge modeling and its application in life sciences: a tale of two ontologies
High throughput glycoproteomics, similar to genomics and proteomics, involves extremely large volumes of distributed, heterogeneous data as a basis for identification and quantifi...
Satya Sanket Sahoo, Christopher Thomas, Amit P. Sh...
ICDM
2007
IEEE
147views Data Mining» more  ICDM 2007»
14 years 1 months ago
Scalable Collaborative Filtering with Jointly Derived Neighborhood Interpolation Weights
Recommender systems based on collaborative filtering predict user preferences for products or services by learning past user-item relationships. A predominant approach to collabo...
Robert M. Bell, Yehuda Koren
MICRO
1999
IEEE
98views Hardware» more  MICRO 1999»
13 years 11 months ago
Access Region Locality for High-Bandwidth Processor Memory System Design
This paper studies an interesting yet less explored behavior of memory access instructions, called access region locality. Unlike the traditional temporal and spatial data localit...
Sangyeun Cho, Pen-Chung Yew, Gyungho Lee