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BMCBI
2006
101views more  BMCBI 2006»
13 years 7 months ago
Hierarchical modularity of nested bow-ties in metabolic networks
Background: The exploration of the structural topology and the organizing principles of genomebased large-scale metabolic networks is essential for studying possible relations bet...
Jing Zhao, Hong Yu, Jianhua Luo, Zhi-Wei Cao, Yi-X...
BMCBI
2006
150views more  BMCBI 2006»
13 years 7 months ago
Cluster analysis of protein array results via similarity of Gene Ontology annotation
Background: With the advent of high-throughput proteomic experiments such as arrays of purified proteins comes the need to analyse sets of proteins as an ensemble, as opposed to t...
Cheryl Wolting, C. Jane McGlade, David Tritchler
CORR
2006
Springer
132views Education» more  CORR 2006»
13 years 7 months ago
The Connectivity of Boolean Satisfiability: Computational and Structural Dichotomies
Boolean satisfiability problems are an important benchmark for questions about complexity, algorithms, heuristics and threshold phenomena. Recent work on heuristics, and the satis...
Parikshit Gopalan, Phokion G. Kolaitis, Elitza N. ...
BMCBI
2007
93views more  BMCBI 2007»
13 years 7 months ago
The topology of metabolic isotope labeling networks
Background: Metabolic Flux Analysis (MFA) based on isotope labeling experiments (ILEs) is a widely established tool for determining fluxes in metabolic pathways. Isotope labeling ...
Michael Weitzel, Wolfgang Wiechert, Katharina N&ou...
IPM
2008
141views more  IPM 2008»
13 years 7 months ago
Towards a unified approach to document similarity search using manifold-ranking of blocks
Document similarity search (i.e. query by example) aims to retrieve a ranked list of documents similar to a query document in a text corpus or on the Web. Most existing approaches...
Xiaojun Wan, Jianwu Yang, Jianguo Xiao