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» Small Phylogeny Problem: Character Evolution Trees
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WOB
2004
13 years 8 months ago
A Multi-Neighbor-Joining Approach for Phylogenetic Tree Reconstruction and Visualization
ABSTRACT. The computationally challenging problem of reconstructing the phylogeny of a set of contemporary data, such as DNA sequences or morphological attributes, was treated by a...
Ana Estela Antunes da Silva, Wilfredo J. Puma-Vill...
ACID
2006
236views Algorithms» more  ACID 2006»
13 years 8 months ago
Kernelization for Convex Recoloring
The Convex Recoloring (CR) problem measures how far a tree of characters differs from exhibiting a so-called "perfect phylogeny". For input consisting of a vertex-colored...
Hans L. Bodlaender, Michael R. Fellows, Michael A....
CANDC
2005
ACM
13 years 7 months ago
Integer linear programming as a tool for constructing trees from quartet data
The task of the quartet puzzling problem is to find a best-fitting binary X-tree for a finite n-set from confidence values for the 3 n 4 binary trees with exactly four leaves from...
Jan Weyer-Menkhoff, Claudine Devauchelle, Alexande...
COCOON
2008
Springer
13 years 9 months ago
Haplotype Inferring Via Galled-Tree Networks Is NP-Complete
The problem of determining haplotypes from genotypes has gained considerable prominence in the research community since the beginning of the HapMap project. Here the focus is on de...
Arvind Gupta, Ján Manuch, Ladislav Stacho, ...
ICCS
2007
Springer
14 years 1 months ago
Modeling of Carrier Transport in Nanowires
Abstract. We consider a physical model of ultrafast evolution of an initial electron distribution in a quantum wire. The electron evolution is described by a quantum-kinetic equati...
Todor V. Gurov, Emanouil I. Atanassov, Mihail Nedj...