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» Stochastic Simulation Algorithms for Chemical Reactions
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GECCO
2004
Springer
128views Optimization» more  GECCO 2004»
14 years 1 months ago
An Informed Operator Based Genetic Algorithm for Tuning the Reaction Rate Parameters of Chemical Kinetics Mechanisms
A reduced model technique based on a reduced number of numerical simulations at a subset of operating conditions for a perfectly stirred reactor is developed in order to increase t...
Lionel Elliott, Derek B. Ingham, Adrian G. Kyne, N...
JSAI
2005
Springer
14 years 1 months ago
Learning Stochastic Logical Automaton
Abstract. This paper is concerned with algorithms for the logical generalisation of probabilistic temporal models from examples. The algorithms combine logic and probabilistic mode...
Hiroaki Watanabe, Stephen Muggleton
BMCBI
2006
179views more  BMCBI 2006»
13 years 8 months ago
Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
Howard Salis, Vassilios Sotiropoulos, Yiannis N. K...
CDC
2010
IEEE
141views Control Systems» more  CDC 2010»
13 years 3 months ago
Hybrid moment computation algorithm for biochemical reaction networks
Moment computation is essential to the analysis of stochastic kinetic models of biochemical reaction networks. It is often the case that the moment evolution, usually the first and...
Yun-Bo Zhao, Jongrae Kim, João Pedro Hespan...
GECCO
2007
Springer
180views Optimization» more  GECCO 2007»
14 years 2 months ago
Towards the coevolution of cellular automata controllers for chemical computing with the B-Z reaction
We propose that the behaviour of non-linear media can be controlled automatically through coevolutionary systems. By extension, forms of unconventional computing, i.e., massively ...
Christopher Stone, Rita Toth, Andrew Adamatzky, Be...