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» Structured Prediction with Relative Margin
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CANDC
2006
ACM
13 years 8 months ago
An RNA folding algorithm including pseudoknots based on dynamic weighted matching
On the basis of maximum weighted matching (MWM) algorithm, we introduced a dynamic weight related with stem length and used a recursive algorithm to predict RNA secondary structur...
Haijun Liu, Dong Xu, Jianlin Shao, Yifei Wang
BMCBI
2007
97views more  BMCBI 2007»
13 years 8 months ago
Relating destabilizing regions to known functional sites in proteins
Background: Most methods for predicting functional sites in protein 3D structures, rely on information on related proteins and cannot be applied to proteins with no known relative...
Benoit H. Dessailly, Marc F. Lensink, Shoshana J. ...
ICDM
2003
IEEE
136views Data Mining» more  ICDM 2003»
14 years 1 months ago
Statistical Relational Learning for Document Mining
A major obstacle to fully integrated deployment of many data mining algorithms is the assumption that data sits in a single table, even though most real-world databases have compl...
Alexandrin Popescul, Lyle H. Ungar, Steve Lawrence...
BIB
2007
82views more  BIB 2007»
13 years 8 months ago
High-throughput modeling and analysis of protein structural dynamics
Protein function is a dynamic property closely related to the conformational mechanisms of protein structure in its physiological environment. To understand and control the functi...
Xiong Liu, Hassan A. Karimi
BMCBI
2007
128views more  BMCBI 2007»
13 years 8 months ago
Detailed estimation of bioinformatics prediction reliability through the Fragmented Prediction Performance Plots
Background: An important and yet rather neglected question related to bioinformatics predictions is the estimation of the amount of data that is needed to allow reliable predictio...
Oliviero Carugo