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BIOINFORMATICS
2006
118views more  BIOINFORMATICS 2006»
13 years 8 months ago
A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
Guido Sanguinetti, Magnus Rattray, Neil D. Lawrenc...
ICDM
2009
IEEE
172views Data Mining» more  ICDM 2009»
13 years 5 months ago
Evaluating Statistical Tests for Within-Network Classifiers of Relational Data
Recently a number of modeling techniques have been developed for data mining and machine learning in relational and network domains where the instances are not independent and ide...
Jennifer Neville, Brian Gallagher, Tina Eliassi-Ra...
AI
2002
Springer
13 years 7 months ago
Learning Bayesian networks from data: An information-theory based approach
This paper provides algorithms that use an information-theoretic analysis to learn Bayesian network structures from data. Based on our three-phase learning framework, we develop e...
Jie Cheng, Russell Greiner, Jonathan Kelly, David ...
BMCBI
2007
129views more  BMCBI 2007»
13 years 8 months ago
Integrated network reconstruction, visualization and analysis using YANAsquare
Background: Modeling of metabolic networks includes tasks such as network assembly, network overview, calculation of metabolic fluxes and testing the robustness of the network. Re...
Roland Schwarz, Chunguang Liang, Christoph Kaleta,...
BMCBI
2007
144views more  BMCBI 2007»
13 years 8 months ago
Accelerated search for biomolecular network models to interpret high-throughput experimental data
Background: The functions of human cells are carried out by biomolecular networks, which include proteins, genes, and regulatory sites within DNA that encode and control protein e...
Suman Datta, Bahrad A. Sokhansanj