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BMCBI
2008
124views more  BMCBI 2008»
13 years 9 months ago
Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
Background: Non-homology based methods such as phylogenetic profiles are effective for predicting functional relationships between proteins with no considerable sequence or struct...
Ryosuke Watanabe, Enrique Morett, Edgar E. Vallejo
BMCBI
2007
102views more  BMCBI 2007»
13 years 9 months ago
Multivariate Analysis and Visualization of Splicing Correlations in Single-Gene Transcriptomes
Background: RNA metabolism, through 'combinatorial splicing', can generate enormous structural diversity in the proteome. Alternative domains may interact, however, with...
Mark C. Emerick, Giovanni Parmigiani, William S. A...
DATAMINE
2006
224views more  DATAMINE 2006»
13 years 9 months ago
Characteristic-Based Clustering for Time Series Data
With the growing importance of time series clustering research, particularly for similarity searches amongst long time series such as those arising in medicine or finance, it is cr...
Xiaozhe Wang, Kate A. Smith, Rob J. Hyndman
JCB
2006
115views more  JCB 2006»
13 years 8 months ago
Designing an A* Algorithm for Calculating Edit Distance between Rooted-Unordered Trees
Tree structures are useful for describing and analyzing biological objects and processes. Consequently, there is a need to design metrics and algorithms to compare trees. A natura...
Yair Horesh, Ramit Mehr, Ron Unger
JMIV
2006
185views more  JMIV 2006»
13 years 8 months ago
Intrinsic Statistics on Riemannian Manifolds: Basic Tools for Geometric Measurements
In medical image analysis and high level computer vision, there is an intensive use of geometric features like orientations, lines, and geometric transformations ranging from simp...
Xavier Pennec