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BMCBI
2007
134views more  BMCBI 2007»
13 years 7 months ago
PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results
Background: BLAST searches are widely used for sequence alignment. The search results are commonly adopted for various functional and comparative genomics tasks such as annotating...
Ji He, Xinbin Dai, Xuechun Zhao
NAR
2008
138views more  NAR 2008»
13 years 7 months ago
TarO: a target optimisation system for structural biology
TarO (http://www.compbio.dundee.ac.uk/taro) offers a single point of reference for key bioinformatics analyses relevant to selecting proteins or domains for study by structural bi...
Ian M. Overton, C. A. Johannes van Niekerk, Lester...
BMCBI
2004
110views more  BMCBI 2004»
13 years 7 months ago
Tools for loading MEDLINE into a local relational database
Background: Researchers who use MEDLINE for text mining, information extraction, or natural language processing may benefit from having a copy of MEDLINE that they can manage loca...
Diane E. Oliver, Gaurav Bhalotia, Ariel S. Schwart...
TIC
2000
Springer
137views System Software» more  TIC 2000»
13 years 11 months ago
Scalable Certification for Typed Assembly Language
Abstract. A type-based certifying compiler maps source code to machine code and target-level type annotations. The target-level annotations make it possible to prove easily that th...
Dan Grossman, J. Gregory Morrisett
PPOPP
2009
ACM
14 years 8 months ago
A compiler-directed data prefetching scheme for chip multiprocessors
Data prefetching has been widely used in the past as a technique for hiding memory access latencies. However, data prefetching in multi-threaded applications running on chip multi...
Dhruva Chakrabarti, Mahmut T. Kandemir, Mustafa Ka...