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RECOMB
2007
Springer
14 years 7 months ago
A Feature-Based Approach to Modeling Protein-DNA Interactions
Transcription factor (TF) binding to its DNA target site is a fundamental regulatory interaction. The most common model used to represent TF binding specificities is a position spe...
Eilon Sharon, Eran Segal
RECOMB
2007
Springer
14 years 7 months ago
Learning Gene Regulatory Networks via Globally Regularized Risk Minimization
Learning the structure of a gene regulatory network from time-series gene expression data is a significant challenge. Most approaches proposed in the literature to date attempt to ...
Yuhong Guo, Dale Schuurmans
RECOMB
2005
Springer
14 years 7 months ago
RIBRA-An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem
We develop an iterative relaxation algorithm, called RIBRA, for NMR protein backbone assignment. RIBRA applies nearest neighbor and weighted maximum independent set algorithms to ...
Kuen-Pin Wu, Jia-Ming Chang, Jun-Bo Chen, Chi-Fon ...
ISBI
2009
IEEE
14 years 1 months ago
Quantitative Comparison of Spot Detection Methods in Live-Cell Fluorescence Microscopy Imaging
In live-cell fluorescence microscopy imaging, quantitative analysis of biological image data generally involves the detection of many subresolution objects, appearing as diffract...
Ihor Smal, Marco Loog, Wiro J. Niessen, Erik H. W....
CIBCB
2008
IEEE
14 years 1 months ago
Very large scale ReliefF for genome-wide association analysis
— The genetic causes of many monogenic diseases have already been discovered. However, most common diseases are actually the result of complex nonlinear interactions between mult...
Margaret J. Eppstein, Paul Haake