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» Task-Oriented Integrated Use of Biological Web Data Sources
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BMCBI
2006
118views more  BMCBI 2006»
13 years 7 months ago
Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration
Background: There is an ever increasing rate of data made available on genetic variation, transcriptomes and proteomes. Similarly, a growing variety of bioinformatic programs are ...
Erdahl T. Teber, Edward Crawford, Kent B. Bolton, ...
BMCBI
2010
164views more  BMCBI 2010»
13 years 7 months ago
Flexible network reconstruction from relational databases with Cytoscape and CytoSQL
Background: Molecular interaction networks can be efficiently studied using network visualization software such as Cytoscape. The relevant nodes, edges and their attributes can be...
Kris Laukens, Jens Hollunder, Thanh Hai Dang, Geer...
ICDE
2003
IEEE
139views Database» more  ICDE 2003»
14 years 8 months ago
Super-Fast XML Wrapper Generation in DB2: A Demonstration
The XML Wrapper is a new feature of the federated database capabilities of DB2/UDB v8. It enables users and applications to issue SQL queries against XML data from a variety of so...
Vanja Josifovski, Sabine Massmann, Felix Naumann
BMCBI
2007
141views more  BMCBI 2007»
13 years 7 months ago
Reconstruction of human protein interolog network using evolutionary conserved network
Background: The recent increase in the use of high-throughput two-hybrid analysis has generated large quantities of data on protein interactions. Specifically, the availability of...
Tao-Wei Huang, Chung-Yen Lin, Cheng-Yan Kao
BPSC
2007
171views Business» more  BPSC 2007»
13 years 8 months ago
XML Databases: Principles and Usage
Originally XML was used as a standard protocol for data exchange in computing. The evolution of information technology has opened up new situations in which XML can be used to aut...
Jaroslav Pokorný