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» The Architecture of a Proteomic Network in the Yeast
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ICDE
2003
IEEE
101views Database» more  ICDE 2003»
14 years 8 months ago
XomatiQ: Living With Genomes, Proteomes, Relations and a Little Bit of XML
In this paper, we describe a system called XomatiQ to address the problem of integration, querying and correlation of biological data. XomatiQ is an integral part of the genomics ...
Sourav S. Bhowmick, Pedro Cruz, Amey V. Laud
KDD
2004
ACM
126views Data Mining» more  KDD 2004»
14 years 7 months ago
High-throughput Protein Interactome Data: Minable or Not?
There is an emerging trend in post-genome biology to study the collection of thousands of protein interaction pairs (protein interactome) derived from high-throughput experiments....
Jake Yue Chen, Andrey Y. Sivachenko, Lang Li
BMCBI
2004
185views more  BMCBI 2004»
13 years 7 months ago
Linear fuzzy gene network models obtained from microarray data by exhaustive search
Background: Recent technological advances in high-throughput data collection allow for experimental study of increasingly complex systems on the scale of the whole cellular genome...
Bahrad A. Sokhansanj, J. Patrick Fitch, Judy N. Qu...
BMCBI
2007
181views more  BMCBI 2007»
13 years 7 months ago
Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases
Background: In recent years, mammalian protein-protein interaction network databases have been developed. The interactions in these databases are either extracted manually from lo...
Seth I. Berger, Jeremy M. Posner, Avi Ma'ayan
BMCBI
2006
157views more  BMCBI 2006»
13 years 7 months ago
Comparison of protein interaction networks reveals species conservation and divergence
Background: Recent progresses in high-throughput proteomics have provided us with a first chance to characterize protein interaction networks (PINs), but also raised new challenge...
Zhi Liang, Meng Xu, Maikun Teng, Liwen Niu