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» The Factor Graph Network Model for Biological Systems
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BIB
2007
137views more  BIB 2007»
13 years 8 months ago
Current progress in network research: toward reference networks for key model organisms
The collection of multiple genome-scale datasets is now routine, and the frontier of research in systems biology has shifted accordingly. Rather than clustering a single dataset t...
Balaji S. Srinivasan, Nigam H. Shah, Jason Flannic...
JSAC
1998
126views more  JSAC 1998»
13 years 8 months ago
Iterative Decoding of Compound Codes by Probability Propagation in Graphical Models
Abstract—We present a unified graphical model framework for describing compound codes and deriving iterative decoding algorithms. After reviewing a variety of graphical models (...
Frank R. Kschischang, Brendan J. Frey
IWANN
2005
Springer
14 years 2 months ago
Modeling Neural Processes in Lindenmayer Systems
Computing in nature as is the case with the human brain is an emerging research area in theoretical computer science. The present paper’s aim is to explore biological neural cell...
Carlos Martín-Vide, Tseren-Onolt Ishdorj
BMCBI
2007
158views more  BMCBI 2007»
13 years 8 months ago
Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries
Background: The joint analysis of several categorical variables is a common task in many areas of biology, and is becoming central to systems biology investigations whose goal is ...
Corinne Dahinden, Giovanni Parmigiani, Mark C. Eme...
CCS
2008
ACM
13 years 10 months ago
Measuring network security using dynamic bayesian network
Given the increasing dependence of our societies on networked information systems, the overall security of these systems should be measured and improved. Existing security metrics...
Marcel Frigault, Lingyu Wang, Anoop Singhal, Sushi...