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NAR
2011
194views Computer Vision» more  NAR 2011»
12 years 11 months ago
GreenPhylDB v2.0: comparative and functional genomics in plants
GreenPhylDB is a database designed for comparative and functional genomics based on complete genomes. Version 2 now contains sixteen full genomes of members of the plantae kingdom...
Mathieu Rouard, Valentin Guignon, Christelle Aluom...
DILS
2007
Springer
14 years 2 months ago
Instance-Based Matching of Large Life Science Ontologies
Ontologies are heavily used in life sciences so that there is increasing value to match different ontologies in order to determine related conceptual categories. We propose a simpl...
Toralf Kirsten, Andreas Thor, Erhard Rahm
BMCBI
2008
170views more  BMCBI 2008»
13 years 8 months ago
Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data
Background: Researchers interested in analysing the expression patterns of functionally related genes usually hope to improve the accuracy of their results beyond the boundaries o...
Tao Xu, LinFang Du, Yan Zhou
BMCBI
2004
143views more  BMCBI 2004»
13 years 8 months ago
Comparing functional annotation analyses with Catmap
Background: Ranked gene lists from microarray experiments are usually analysed by assigning significance to predefined gene categories, e.g., based on functional annotations. Tool...
Thomas Breslin, Patrik Edén, Morten Krogh
DIWEB
2004
13 years 10 months ago
Ontology-based integration for Sharing Knowledge over the Web
In this paper, we propose a methodology developed in the framework of the VISPO project for engineering a three-layer ontology, based on the conceptualization, integration, synthes...
Devis Bianchini, Valeria De Antonellis