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» The Megaprior Heuristic for Discovering Protein Sequence Pat...
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BMCBI
2002
109views more  BMCBI 2002»
13 years 7 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
WWW
2001
ACM
14 years 8 months ago
IEPAD: information extraction based on pattern discovery
The research in information extraction (IE) regards the generation of wrappers that can extract particular information from semistructured Web documents. Similar to compiler gener...
Chia-Hui Chang, Shao-Chen Lui
ACMSE
2007
ACM
13 years 11 months ago
Finding association rules of cis-regulatory elements involved in alternative splicing
Alternative splicing (AS) is a major mechanism to generate protein diversity. A single gene might generate hundreds or even thousands of different proteins. Recently, powerful lar...
Jihye Kim, Sihui Zhao, Steffen Heber
KDD
2005
ACM
91views Data Mining» more  KDD 2005»
14 years 7 months ago
On mining cross-graph quasi-cliques
Joint mining of multiple data sets can often discover interesting, novel, and reliable patterns which cannot be obtained solely from any single source. For example, in cross-marke...
Jian Pei, Daxin Jiang, Aidong Zhang
SSDBM
2006
IEEE
163views Database» more  SSDBM 2006»
14 years 1 months ago
ACache: Using Caching to Improve the Performance of Multiple Sequence Alignments
Multiple sequence alignment represents a class of powerful bioinformatics tools with many uses in computational biology ranging from discovery of characteristic motifs and conserv...
Xun Tu, Kajal T. Claypool, Cindy X. Chen