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BMCBI
2005
125views more  BMCBI 2005»
13 years 9 months ago
Query3d: a new method for high-throughput analysis of functional residues in protein structures
Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
Gabriele Ausiello, Allegra Via, Manuela Helmer-Cit...
BMCBI
2006
103views more  BMCBI 2006»
13 years 10 months ago
Domain-based small molecule binding site annotation
Background: Accurate small molecule binding site information for a protein can facilitate studies in drug docking, drug discovery and function prediction, but small molecule bindi...
Kevin A. Snyder, Howard J. Feldman, Michel Dumonti...
APBC
2004
125views Bioinformatics» more  APBC 2004»
13 years 11 months ago
A Dihedral Angle Database of Short Sub-sequences for Protein Structure Prediction
Protein structure prediction is considered to be the holy grail of bioinformatics. Ab initio and homology modelling are two important groups of methods used in protein structure p...
Saravanan Dayalan, Savitri Bevinakoppa, Heiko Schr...
ICMENS
2003
IEEE
80views Hardware» more  ICMENS 2003»
14 years 3 months ago
Molecular Dynamics Calculations of the Electrostatic Properties of Tubulin and Their Consequences for Microtubules
crystallographic results were made available through the Protein Data Bank (PDB) (entries: ITUB and IJFF) which allowed us to view the 3D atomic resolution structure oftubulin. (se...
J. A. Tuszynski, E. J. Carpenter, E. Crawford, J. ...
NAR
2011
277views Computer Vision» more  NAR 2011»
13 years 20 days ago
The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection
The current 18th Database Issue of Nucleic Acids Research features descriptions of 96 new and 83 updated online databases covering various areas of molecular biology. It includes ...
Michael Y. Galperin, Guy Cochrane