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BMCBI
2008
95views more  BMCBI 2008»
13 years 10 months ago
Mining protein networks for synthetic genetic interactions
Background: The local connectivity and global position of a protein in a protein interaction network are known to correlate with some of its functional properties, including its e...
Sri R. Paladugu, Shan Zhao, Animesh Ray, Alpan Rav...
BMCBI
2006
129views more  BMCBI 2006»
13 years 10 months ago
Functional clustering of yeast proteins from the protein-protein interaction network
Background: The abundant data available for protein interaction networks have not yet been fully understood. New types of analyses are needed to reveal organizational principles o...
Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jerni...
BMCBI
2007
149views more  BMCBI 2007»
13 years 10 months ago
SAMPI: Protein Identification with Mass Spectra Alignments
Background: Mass spectrometry based peptide mass fingerprints (PMFs) offer a fast, efficient, and robust method for protein identification. A protein is digested (usually by tryps...
Hans-Michael Kaltenbach, Andreas Wilke, Sebastian ...
DATE
2009
IEEE
86views Hardware» more  DATE 2009»
14 years 4 months ago
A power-efficient migration mechanism for D-NUCA caches
D-NUCA L2 caches are able to tolerate the increasing wire delay effects due to technology scaling thanks to their banked organization, broadcast line search and data promotion/dem...
Alessandro Bardine, Manuel Comparetti, Pierfrances...
CSB
2005
IEEE
136views Bioinformatics» more  CSB 2005»
14 years 3 months ago
An Algebraic Geometry Approach to Protein Structure Determination from NMR Data
Our paper describes the first provably-efficient algorithm for determining protein structures de novo, solely from experimental data. We show how the global nature of a certain ...
Lincong Wang, Ramgopal R. Mettu, Bruce Randall Don...