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ASPDAC
2007
ACM
116views Hardware» more  ASPDAC 2007»
14 years 3 months ago
MODLEX: A Multi Objective Data Layout EXploration Framework for Embedded Systems-on-Chip
The memory subsystem is a major contributor to the performance, power, and area of complex SoCs used in feature rich multimedia products. Hence, memory architecture of the embedded...
T. S. Rajesh Kumar, C. P. Ravikumar, R. Govindaraj...
CBMS
2006
IEEE
14 years 5 months ago
MS2DB: An Algorithmic Approach to Determine Disulfide Linkage Patterns
Determining the number and location of disulfide bonds within a protein provide valuable insight into the protein’s three-dimensional structure. Purely computational methods tha...
Timothy Lee, Rahul Singh, Ten-Yang Yen, Bruce Mach...
BIBE
2005
IEEE
116views Bioinformatics» more  BIBE 2005»
14 years 4 months ago
Stochastic Model of Protease-Ligand Reactions
Prediction of protein tertiary structure based on amino acid sequence is one of the most challenging open questions in computational molecular biology. The two most common experim...
Paul E. Anderson, Douglas W. Raiford, Deacon J. Sw...
ISMB
1993
14 years 14 days ago
Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification
Molecular sequence megaclassification is a technique for automated protein sequence analysis and annotation. Implementation of the method has been limited by the need to store and...
David J. States, Nomi L. Harris, Lawrence Hunter
WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
14 years 3 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert