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BMCBI
2006
140views more  BMCBI 2006»
15 years 4 months ago
SNP-PHAGE - High throughput SNP discovery pipeline
Background: Single nucleotide polymorphisms (SNPs) as defined here are single base sequence changes or short insertion/deletions between or within individuals of a given species. ...
Lakshmi K. Matukumalli, John J. Grefenstette, Davi...
BMCBI
2002
214views more  BMCBI 2002»
15 years 4 months ago
Automated modelling of signal transduction networks
Background: Intracellular signal transduction is achieved by networks of proteins and small molecules that transmit information from the cell surface to the nucleus, where they ul...
Martin Steffen, Allegra Petti, John Aach, Patrik D...
WWW
2009
ACM
16 years 5 months ago
A flight meta-search engine with metamorph
We demonstrate a flight meta-search engine that is based on the Metamorph framework. Metamorph provides mechanisms to model web forms together with the interactions which are need...
Bernhard Krüpl, Wolfgang Holzinger, Yansen Da...
BMCBI
2011
14 years 8 months ago
Efficient alignment of pyrosequencing reads for re-sequencing applications
Background: Over the past few years, new massively parallel DNA sequencing technologies have emerged. These platforms generate massive amounts of data per run, greatly reducing th...
Francisco Fernandes, Paulo G. S. da Fonseca, Lu&ia...
KDD
2009
ACM
219views Data Mining» more  KDD 2009»
16 years 5 months ago
Structured correspondence topic models for mining captioned figures in biological literature
A major source of information (often the most crucial and informative part) in scholarly articles from scientific journals, proceedings and books are the figures that directly pro...
Amr Ahmed, Eric P. Xing, William W. Cohen, Robert ...