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» Three Improvements to the BLASTP Search of Genome Databases
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VLDB
2007
ACM
145views Database» more  VLDB 2007»
14 years 7 months ago
LCS-TRIM: Dynamic Programming Meets XML Indexing and Querying
In this article, we propose a new approach for querying and indexing a database of trees with specific applications to XML datasets. Our approach relies on representing both the q...
Shirish Tatikonda, Srinivasan Parthasarathy, Matth...
CIKM
2009
Springer
14 years 2 months ago
Adaptive relevance feedback in information retrieval
Relevance Feedback has proven very effective for improving retrieval accuracy. A difficult yet important problem in all relevance feedback methods is how to optimally balance the...
Yuanhua Lv, ChengXiang Zhai
WOB
2008
101views Bioinformatics» more  WOB 2008»
13 years 9 months ago
Top-Down Hierarchical Ensembles of Classifiers for Predicting G-Protein-Coupled-Receptor Functions
Abstract. Despite the recent advances in Molecular Biology, the function of a large amount of proteins is still unknown. An approach that can be used in the prediction of a protein...
Eduardo P. Costa, Ana Carolina Lorena, André...
APBC
2004
126views Bioinformatics» more  APBC 2004»
13 years 9 months ago
Informative 3D Visualization of Multiple Protein Structures
With the continued growth of three dimensional structural information databases comes a corresponding increase in interest in this data for the study of new sequences and an ever-...
Paulo Lai, Warren Kaplan, W. Bret Church, Raymond ...
PAMI
2008
208views more  PAMI 2008»
13 years 7 months ago
BoostMap: An Embedding Method for Efficient Nearest Neighbor Retrieval
This paper describes BoostMap, a method for efficient nearest neighbor retrieval under computationally expensive distance measures. Database and query objects are embedded into a v...
Vassilis Athitsos, Jonathan Alon, Stan Sclaroff, G...