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» Tilings as a programming exercise
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BMCBI
2007
130views more  BMCBI 2007»
13 years 9 months ago
Differential analysis for high density tiling microarray data
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
CEC
2005
IEEE
14 years 3 months ago
Automated tile design for self-assembly conformations
AbstractSelf-Assembly is a powerful autopoietic mechanism ubiquitous throughout the natural world. It may be found at the molecular scale and also at astronomical scales. Self-asse...
Germán Terrazas, Natalio Krasnogor, Graham ...
JISE
1998
84views more  JISE 1998»
13 years 9 months ago
Determining the Idle Time of a Tiling: New Results
In the framework of perfect loop nests with uniform dependences, tiling has been extensively studied as a source-to-source program transformation. We build upon recent results by ...
Frederic Desprez, Jack Dongarra, Fabrice Rastello,...
TJS
2002
83views more  TJS 2002»
13 years 9 months ago
An I/O-Conscious Tiling Strategy for Disk-Resident Data Sets
This paper describes a tiling technique that can be used by application programmers and optimizing compilers to obtain I/O-efficient versions of regular scientific loop nests. Due ...
Mahmut T. Kandemir, Alok N. Choudhary, J. Ramanuja...
CGO
2006
IEEE
14 years 3 months ago
Constructing Virtual Architectures on a Tiled Processor
As the amount of available silicon resources on one chip increases, we have seen the advent of ever increasing parallel resources integrated on-chip. Many architectures use these ...
David Wentzlaff, Anant Agarwal