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BMCBI
2007
89views more  BMCBI 2007»
13 years 10 months ago
Primique: automatic design of specific PCR primers for each sequence in a family
Background: In many contexts, researchers need specific primers for all sequences in a family such that each primer set amplifies only its target sequence and none of the others, ...
Jakob Fredslund, Mette Lange
IJCAI
1989
13 years 11 months ago
Temporal Matching: Recognizing Dynamic Situations from Discrete Measurements
The converse problem of measurement interpretation is event recognition. In situations which are characterized by a specific order of events, a single snapshot is not sufficient t...
Klaus Nökel
ICML
2010
IEEE
13 years 11 months ago
Forgetting Counts: Constant Memory Inference for a Dependent Hierarchical Pitman-Yor Process
We propose a novel dependent hierarchical Pitman-Yor process model for discrete data. An incremental Monte Carlo inference procedure for this model is developed. We show that infe...
Nicholas Bartlett, David Pfau, Frank Wood
BMCBI
2008
164views more  BMCBI 2008»
13 years 10 months ago
Word correlation matrices for protein sequence analysis and remote homology detection
Background: Classification of protein sequences is a central problem in computational biology. Currently, among computational methods discriminative kernel-based approaches provid...
Thomas Lingner, Peter Meinicke
DATE
2000
IEEE
93views Hardware» more  DATE 2000»
14 years 2 months ago
Fast Evaluation of Sequence Pair in Block Placement by Longest Common Subsequence Computation
In [1], Murata et al introduced an elegant representation of block placement called sequence pair. All block placement algorithms which are based on sequence pairs use simulated a...
Xiaoping Tang, D. F. Wong, Ruiqi Tian