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RECONFIG
2009
IEEE
182views VLSI» more  RECONFIG 2009»
14 years 2 months ago
Scalability Studies of the BLASTn Scan and Ungapped Extension Functions
BLASTn is a ubiquitous tool used for large scale DNA analysis. Detailed profiling tests reveal that the most computationally intensive sections of the BLASTn algorithm are the sc...
Siddhartha Datta, Ron Sass
SGP
2007
13 years 9 months ago
Developable surfaces from arbitrary sketched boundaries
Developable surfaces are surfaces that can be unfolded into the plane with no distortion. Although ubiquitous in our everyday surroundings, modeling them using existing tools requ...
Kenneth Rose, Alla Sheffer, Jamie Wither, Marie-Pa...
BMCBI
2008
130views more  BMCBI 2008»
13 years 7 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
WEBDB
2010
Springer
168views Database» more  WEBDB 2010»
14 years 12 days ago
WikiAnalytics: Disambiguation of Keyword Search Results on Highly Heterogeneous Structured Data
Wikipedia infoboxes is an example of a seemingly structured, yet extraordinarily heterogeneous dataset, where any given record has only a tiny fraction of all possible fields. Su...
Andrey Balmin, Emiran Curtmola
COMGEO
2010
ACM
13 years 4 months ago
A new paradigm for integrated environmental monitoring
The vision of an integrated Earth observation system to help protect and sustain the planet and its inhabitants is significant and timely, and thus has been identified recently by...
Kevin Montgomery, Carsten W. Mundt