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ICPPW
2009
IEEE
13 years 5 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
BMCBI
2010
154views more  BMCBI 2010»
13 years 8 months ago
An eScience-Bayes strategy for analyzing omics data
Background: The omics fields promise to revolutionize our understanding of biology and biomedicine. However, their potential is compromised by the challenge to analyze the huge da...
Martin Eklund, Ola Spjuth, Jarl E. S. Wikberg
SIGSOFT
2005
ACM
14 years 8 months ago
Lightweight object specification with typestates
Previous work has proven typestates to be useful for modeling protocols in object-oriented languages. We build on this work by addressing substitutability of subtypes as well as i...
Kevin Bierhoff, Jonathan Aldrich
ICPP
1996
IEEE
13 years 12 months ago
Polynomial-Time Nested Loop Fusion with Full Parallelism
Data locality and synchronization overhead are two important factors that affect the performance of applications on multiprocessors. Loop fusion is an effective way for reducing s...
Edwin Hsing-Mean Sha, Chenhua Lang, Nelson L. Pass...
GLVLSI
2009
IEEE
125views VLSI» more  GLVLSI 2009»
13 years 11 months ago
Spatial and temporal design debug using partial MaxSAT
Design debug remains one of the major bottlenecks in the VLSI design cycle today. Existing automated solutions strive to aid engineers in reducing the debug effort by identifying ...
Yibin Chen, Sean Safarpour, Andreas G. Veneris, Jo...