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CODES
2005
IEEE
14 years 1 months ago
Blue matter on blue gene/L: massively parallel computation for biomolecular simulation
This paper provides an overview of the Blue Matter application development effort within the Blue Gene project that supports our scientific simulation efforts in the areas of pro...
Robert S. Germain, Blake G. Fitch, Aleksandr Raysh...
DASFAA
2005
IEEE
209views Database» more  DASFAA 2005»
14 years 1 months ago
PADS: Protein Structure Alignment Using Directional Shape Signatures
A novel approach for similarity search on the protein structure databases is proposed. PADS (Protein Alignment by Directional shape Signatures) incorporates the three dimensional ...
S. Alireza Aghili, Divyakant Agrawal, Amr El Abbad...
HPCS
2005
IEEE
14 years 1 months ago
A Lightweight, Scalable Grid Computing Framework for Parallel Bioinformatics Applications
Abstract— In recent years our society has witnessed an unprecedented growth in computing power available to tackle important problems in science, engineering and medicine. For ex...
Hans De Sterck, Rob S. Markel, Rob Knight
ICDM
2005
IEEE
161views Data Mining» more  ICDM 2005»
14 years 1 months ago
Making Logistic Regression a Core Data Mining Tool with TR-IRLS
Binary classification is a core data mining task. For large datasets or real-time applications, desirable classifiers are accurate, fast, and need no parameter tuning. We presen...
Paul Komarek, Andrew W. Moore
SAC
2005
ACM
14 years 1 months ago
Graphical rule-based representation of signal-transduction networks
The process by which a cell senses and responds to its environment, as in signal transduction, is often mediated by a network of protein-protein interactions, in which proteins co...
James R. Faeder, Michael L. Blinov, William S. Hla...