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BMCBI
2008
117views more  BMCBI 2008»
13 years 7 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...
DKE
2008
172views more  DKE 2008»
13 years 7 months ago
An XML Schema integration and query mechanism system
The availability of large amounts of heterogeneous distributed web data necessitates the integration of XML data from multiple XML sources for many reasons. For example, currently,...
Sanjay Kumar Madria, Kalpdrum Passi, Sourav S. Bho...
BMCBI
2006
153views more  BMCBI 2006»
13 years 7 months ago
Automatic document classification of biological literature
Background: Document classification is a wide-spread problem with many applications, from organizing search engine snippets to spam filtering. We previously described Textpresso, ...
David Chen, Hans-Michael Müller, Paul W. Ster...
BMCBI
2007
144views more  BMCBI 2007»
13 years 7 months ago
Gene analogue finder: a GRID solution for finding functionally analogous gene products
Background: To date more than 2,1 million gene products from more than 100000 different species have been described specifying their function, the processes they are involved in a...
Angelica Tulipano, Giacinto Donvito, Flavio Licciu...
BMCBI
2007
207views more  BMCBI 2007»
13 years 7 months ago
Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
Background: Many important high throughput projects use in situ hybridization and may require the analysis of images of spatial cross sections of organisms taken with cellular lev...
Manjunatha Jagalur, Chris Pal, Erik G. Learned-Mil...