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» Using Formal Concept Analysis for Microarray Data Comparison
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AIME
2005
Springer
14 years 1 months ago
Interactive Knowledge Validation in CBR for Decision Support in Medicine
Abstract. In most case-based reasoning (CBR) systems there has been little research done on validating new knowledge, specifically on how previous knowledge differs from current k...
Monica H. Ou, Geoff A. W. West, Mihai Lazarescu, C...
BMCBI
2007
156views more  BMCBI 2007»
13 years 7 months ago
Bio: : NEXUS: a Perl API for the NEXUS format for comparative biological data
Background: Evolutionary analysis provides a formal framework for comparative analysis of genomic and other data. In evolutionary analysis, observed data are treated as the termin...
Thomas Hladish, Vivek Gopalan, Chengzhi Liang, Wei...
BMCBI
2004
113views more  BMCBI 2004»
13 years 7 months ago
Leveraging two-way probe-level block design for identifying differential gene expression with high-density oligonucleotide array
Background: To identify differentially expressed genes across experimental conditions in oligonucleotide microarray experiments, existing statistical methods commonly use a summar...
Leah Barrera, Chris Benner, Yong-Chuan Tao, Elizab...
WABI
2009
Springer
155views Bioinformatics» more  WABI 2009»
14 years 2 months ago
A Markov Classification Model for Metabolic Pathways
Background: This paper considers the problem of identifying pathways through metabolic networks that relate to a specific biological response. Our proposed model, HME3M, first ide...
Timothy Hancock, Hiroshi Mamitsuka
GECCO
2004
Springer
138views Optimization» more  GECCO 2004»
14 years 1 months ago
Exploratory Data Analysis with Interactive Evolution
We illustrate with two simple examples how Interactive Evolutionary Computation (IEC) can be applied to Exploratory Data Analysis (EDA). IEC is particularly valuable in an EDA cont...
Sergey Malinchik, Eric Bonabeau