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BMCBI
2007
129views more  BMCBI 2007»
13 years 8 months ago
HoughFeature, a novel method for assessing drug effects in three-color cDNA microarray experiments
Background: Three-color microarray experiments can be performed to assess drug effects on the genomic scale. The methodology may be useful in shortening the cycle, reducing the co...
Hongya Zhao, Hong Yan
CLEIEJ
2007
152views more  CLEIEJ 2007»
13 years 8 months ago
Gene Expression Analysis using Markov Chains extracted from RNNs
Abstract. This paper present a new approach for the analysis of gene expression, by extracting a Markov Chain from trained Recurrent Neural Networks (RNNs). A lot of microarray dat...
Igor Lorenzato Almeida, Denise Regina Pechmann Sim...
SDM
2009
SIAM
176views Data Mining» more  SDM 2009»
14 years 5 months ago
Discovery of Geospatial Discriminating Patterns from Remote Sensing Datasets.
Large amounts of remotely sensed data calls for data mining techniques to fully utilize their rich information content. In this paper, we study new means of discovery and summariz...
Wei Ding 0003, Tomasz F. Stepinski, Josue Salazar
BMCBI
2010
151views more  BMCBI 2010»
13 years 8 months ago
TF-finder: A software package for identifying transcription factors involved in biological processes using microarray data and e
Background: Identification of transcription factors (TFs) involved in a biological process is the first step towards a better understanding of the underlying regulatory mechanisms...
Xiaoqi Cui, Tong Wang, Huann-Sheng Chen, Victor Bu...
BMCBI
2002
188views more  BMCBI 2002»
13 years 8 months ago
The limit fold change model: A practical approach for selecting differentially expressed genes from microarray data
Background: The biomedical community is developing new methods of data analysis to more efficiently process the massive data sets produced by microarray experiments. Systematic an...
David M. Mutch, Alvin Berger, Robert Mansourian, A...