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SDM
2004
SIAM
141views Data Mining» more  SDM 2004»
13 years 11 months ago
Visually Mining through Cluster Hierarchies
Similarity search in database systems is becoming an increasingly important task in modern application domains such as multimedia, molecular biology, medical imaging, computer aid...
Stefan Brecheisen, Hans-Peter Kriegel, Peer Kr&oum...
BMCBI
2007
175views more  BMCBI 2007»
13 years 10 months ago
CLUSS: Clustering of protein sequences based on a new similarity measure
Background: The rapid burgeoning of available protein data makes the use of clustering within families of proteins increasingly important. The challenge is to identify subfamilies...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski...
BMCBI
2002
109views more  BMCBI 2002»
13 years 10 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
ICDE
2000
IEEE
82views Database» more  ICDE 2000»
14 years 11 months ago
Similarity Search for Multidimensional Data Sequences
Time-series data, which are a series of one-dimensional real numbers, have been studied in various database applications. In this paper, we extend the traditional similarity searc...
Seok-Lyong Lee, Seok-Ju Chun, Deok-Hwan Kim, Ju-Ho...
BMCBI
2008
137views more  BMCBI 2008»
13 years 10 months ago
Evading the annotation bottleneck: using sequence similarity to search non-sequence gene data
Background: Non-sequence gene data (images, literature, etc.) can be found in many different public databases. Access to these data is mostly by text based methods using gene name...
Michael J. Gilchrist, Mikkel B. Christensen, Richa...