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» Visualizing Dynamic Molecular Conformations
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JCC
2002
127views more  JCC 2002»
13 years 7 months ago
Effective Born radii in the generalized Born approximation: The importance of being perfect
: Generalized Born (GB) models provide, for many applications, an accurate and computationally facile estimate of the electrostatic contribution to aqueous solvation. The GB models...
Alexey Onufriev, David A. Case, Donald Bashford
VISUALIZATION
2005
IEEE
14 years 1 months ago
Volume rendering of smoke propagation CFD data
The evacuation of buildings in the event of a fire requires careful planning of ventilation and evacuation routes during early architectural design stages. Different designs are ...
Oliver Staubli, Christian Sigg, Ronald Peikert, Ma...
BMCBI
2005
94views more  BMCBI 2005»
13 years 7 months ago
Visualization-based discovery and analysis of genomic aberrations in microarray data
Background: Chromosomal copy number changes (aneuploidies) play a key role in cancer progression and molecular evolution. These copy number changes can be studied using microarray...
Chad L. Myers, Xing Chen, Olga G. Troyanskaya
SC
2005
ACM
14 years 1 months ago
SPICE: Simulated Pore Interactive Computing Environment
— SPICE aims to understand the vital process of translocation of biomolecules across protein pores by computing the free energy profile of the translocating biomolecule along th...
Shantenu Jha, Peter V. Coveney, Matt J. Harvey
ENTCS
2006
155views more  ENTCS 2006»
13 years 7 months ago
Biomolecular Agents as Multi-behavioural Concurrent Objects
In recent years, there has been increasing interest in computational models of biological systems based on various calculi of communicating processes, such as the stochastic pi-ca...
Denys Duchier, Céline Kuttler