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ICDM
2005
IEEE
215views Data Mining» more  ICDM 2005»
14 years 29 days ago
CLUGO: A Clustering Algorithm for Automated Functional Annotations Based on Gene Ontology
We address the issue of providing highly informative and comprehensive annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a...
In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen
JSAI
2005
Springer
14 years 25 days ago
Towards Ontologies of Functionality and Semantic Annotation for Technical Knowledge Management
Abstract. This research aims at promoting sharing of knowledge about functionality of artifacts among engineers, which tends to be implicit in practice. In order to provide a conce...
Yoshinobu Kitamura, Naoya Washio, Yusuke Koji, Rii...
BMCBI
2008
141views more  BMCBI 2008»
13 years 7 months ago
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation
Background: Automated protein function prediction methods are needed to keep pace with high-throughput sequencing. With the existence of many programs and databases for inferring ...
Chenggang Yu, Nela Zavaljevski, Valmik Desai, Seth...
BMCBI
2004
92views more  BMCBI 2004»
13 years 7 months ago
BioBuilder as a database development and functional annotation platform for proteins
Background: The explosion in biological information creates the need for databases that are easy to develop, easy to maintain and can be easily manipulated by annotators who are m...
J. Daniel Navarro, Naveen Talreja, Suraj Peri, B. ...
BMCBI
2007
131views more  BMCBI 2007»
13 years 7 months ago
On the detection of functionally coherent groups of protein domains with an extension to protein annotation
Background: Protein domains coordinate to perform multifaceted cellular functions, and domain combinations serve as the functional building blocks of the cell. The available metho...
William A. McLaughlin, Ken Chen, Tingjun Hou, Wei ...