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WABI
2007
Springer
110views Bioinformatics» more  WABI 2007»
14 years 2 months ago
Haplotype Inference Via Hierarchical Genotype Parsing
The within-species genetic variation due to recombinations leads to a mosaic-like structure of DNA. This structure can be modeled, e.g. by parsing sample sequences of current DNA w...
Pasi Rastas, Esko Ukkonen
BMCBI
2007
145views more  BMCBI 2007»
13 years 8 months ago
Colony size measurement of the yeast gene deletion strains for functional genomics
Background: Numerous functional genomics approaches have been developed to study the model organism yeast, Saccharomyces cerevisiae, with the aim of systematically understanding t...
Negar Memarian, Matthew Jessulat, Javad Alirezaie,...
BMCBI
2007
141views more  BMCBI 2007»
13 years 8 months ago
HeliCis: a DNA motif discovery tool for colocalized motif pairs with periodic spacing
Background: Correct temporal and spatial gene expression during metazoan development relies on combinatorial interactions between different transcription factors. As a consequence...
Erik Larsson, Per Lindahl, Petter Mostad
BMCBI
2007
126views more  BMCBI 2007»
13 years 8 months ago
Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation
Background: Biochemical investigations over the last decades have elucidated an increasingly complete image of the cellular metabolism. To derive a systems view for the regulation...
Gunnar Schramm, Marc Zapatka, Roland Eils, Rainer ...
ICFCA
2007
Springer
14 years 15 days ago
A New and Useful Syntactic Restriction on Rule Semantics for Tabular Datasets
Different rule semantics have been successively defined in many contexts such as implications in artificial intelligence, functional dependencies in databases or association rules...
Marie Agier, Jean-Marc Petit