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BMCBI
2007
93views more  BMCBI 2007»
13 years 8 months ago
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition
Background: Predicting a protein’s structural class from its amino acid sequence is a fundamental problem in computational biology. Much recent work has focused on developing ne...
Iain Melvin, Eugene Ie, Rui Kuang, Jason Weston, W...
DKE
2007
130views more  DKE 2007»
13 years 8 months ago
Enabling access-privacy for random walk based data analysis applications
Random walk graph and Markov chain based models are used heavily in many data and system analysis domains, including web, bioinformatics, and queuing. These models enable the desc...
Ping Lin, K. Selçuk Candan
BMCBI
2005
120views more  BMCBI 2005»
13 years 8 months ago
Robust detection of periodic time series measured from biological systems
Background: Periodic phenomena are widespread in biology. The problem of finding periodicity in biological time series can be viewed as a multiple hypothesis testing of the spectr...
Miika Ahdesmäki, Harri Lähdesmäki, ...
BMCBI
2005
79views more  BMCBI 2005»
13 years 8 months ago
Cyclic nucleotide binding proteins in the Arabidopsis thaliana and Oryza sativa genomes
Background: Cyclic nucleotides are ubiquitous intracellular messengers. Until recently, the roles of cyclic nucleotides in plant cells have proven difficult to uncover. With an un...
Dave Bridges, Marie E. Fraser, Greg B. G. Moorhead
BMCBI
2005
77views more  BMCBI 2005»
13 years 8 months ago
Ontological visualization of protein-protein interactions
Background: Cellular processes require the interaction of many proteins across several cellular compartments. Determining the collective network of such interactions is an importa...
Harold J. Drabkin, Christopher Hollenbeck, David P...