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BMCBI
2007
130views more  BMCBI 2007»
13 years 11 months ago
Differential analysis for high density tiling microarray data
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
BMCBI
2005
127views more  BMCBI 2005»
13 years 10 months ago
Genomes are covered with ubiquitous 11 bp periodic patterns, the "class A flexible patterns"
Background: The genomes of prokaryotes and lower eukaryotes display a very strong 11 bp periodic bias in the distribution of their nucleotides. This bias is present throughout a g...
Etienne Larsabal, Antoine Danchin
CIE
2007
Springer
14 years 5 months ago
Strict Self-assembly of Discrete Sierpinski Triangles
Winfree (1998) showed that discrete Sierpinski triangles can self-assemble in the Tile Assembly Model. A striking molecular realization of this self-assembly, using DNA tiles a fe...
James I. Lathrop, Jack H. Lutz, Scott M. Summers
DLT
2007
14 years 10 days ago
Two Element Unavoidable Sets of Partial Words
d Abstract) F. Blanchet-Sadri1 , N.C. Brownstein2 , and Justin Palumbo3 1 Department of Computer Science, University of North Carolina, P.O. Box 26170, Greensboro, NC 27402–6170,...
Francine Blanchet-Sadri, N. C. Brownstein, Justin ...
DLT
2007
14 years 10 days ago
Duplication Roots
Recently the duplication closure of words and languages has received much interest. We investigate a reversal of it: the duplication root reduces a word to a square-free one. After...
Peter Leupold