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FPL
2010
Springer
188views Hardware» more  FPL 2010»
13 years 6 months ago
SeqHive: A Reconfigurable Computer Cluster for Genome Re-sequencing
We demonstrate how Field Programmable Gate Arrays (FPGAs) may be used to address the computing challenges associated with assembling genome sequences from recent ultra-high-through...
Kristian Stevens, Henry Chen, Terry Filiba, Peter ...
ICSM
2009
IEEE
13 years 5 months ago
Decomposing object-oriented class modules using an agglomerative clustering technique
Software can be considered a live entity, as it undergoes many alterations throughout its lifecycle. Furthermore, developers do not usually retain a good design in favor of adding...
Marios Fokaefs, Nikolaos Tsantalis, Alexander Chat...
IPPS
2005
IEEE
14 years 1 months ago
MegaProto: A Low-Power and Compact Cluster for High-Performance Computing
“MegaProto” is a proof-of-concept prototype for our project “Mega-Scale Computing Based on Low-Power Technology and Workload Modeling”, implementing our key idea that a mi...
Hiroshi Nakashima, Hiroshi Nakamura, Mitsuhisa Sat...
IPPS
2005
IEEE
14 years 1 months ago
Performance Implications of Periodic Checkpointing on Large-Scale Cluster Systems
Large-scale systems like BlueGene/L are susceptible to a number of software and hardware failures that can affect system performance. Periodic application checkpointing is a commo...
Adam J. Oliner, Ramendra K. Sahoo, José E. ...
NAR
2010
148views more  NAR 2010»
13 years 2 months ago
SIMAP - a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters
The prediction of protein function as well as the reconstruction of evolutionary genesis employing sequence comparison at large is still the most powerful tool in sequence analysi...
Thomas Rattei, Patrick Tischler, Stefan Götz,...